Aliases : OTP86
Description : ssDNA-binding protein *(OSB) & original description: CDS=1-2283
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0283.g063049 | |
| Cluster | HCCA: Cluster_19 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00263110 | No alias | Pentatricopeptide repeat-containing protein At1g03540... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00011p00266560 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00056p00185560 | VAC1, ECB2, ATECB2 | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G56570 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G33760 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G01580 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G03580 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G21300 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G35130 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| AT5G06540 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g035608 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g036254 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g054918 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g058262 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g067964 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g099248 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03840 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05916 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07029 | EMB2261 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g16416 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23634 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g30196 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g55091 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g27914 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g28416 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene27806.t1 | CRR2, Aspi01Gene27806 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene65851.t1 | Aspi01Gene65851 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0024.g020314 | OTP84 | not classified & original description: CDS=1-1800 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0125.g048584 | CRR22 | not classified & original description: CDS=1-1611 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s1396.g102567 | No alias | not classified & original description: CDS=1-1371 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g02644 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g02717 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04037 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05246 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g05331 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07289 | MEF21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07780 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g16998 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19911 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g31307 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g35045 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g35153 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g66427 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g66834 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67804 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67912 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G093000.1 | Ceric.05G093000 | not classified & original description: pacid=50577993... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G028100.1 | Ceric.13G028100 | not classified & original description: pacid=50635194... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z005100.1 | Ceric.1Z005100 | not classified & original description: pacid=50567700... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.23G019700.1 | Ceric.23G019700 | not classified & original description: pacid=50611424... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.24G019600.1 | Ceric.24G019600 | not classified & original description: pacid=50629269... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.30G071100.1 | Ceric.30G071100 | not classified & original description: pacid=50608720... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17309 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g03842 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g09625 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g13626 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18446 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g22835 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g26917 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Gb_00776 | No alias | Pentatricopeptide repeat-containing protein At5g50390,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g01115.1 | LOC_Os01g01115 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g44480.1 | LOC_Os02g44480 | Pentatricopeptide repeat-containing protein At5g39350... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g56400.1 | LOC_Os03g56400 | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g63510.1 | LOC_Os03g63510 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g33840.1 | LOC_Os04g33840 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g05490.1 | LOC_Os05g05490 | Pentatricopeptide repeat-containing protein At3g05340... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g06650.1 | LOC_Os12g06650 | Pentatricopeptide repeat-containing protein At4g15720... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g22109 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g26586 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g33499 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06268 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_27726g0010 | VAC1, ECB2, ATECB2 | RNA editing factor (ECB2/VAC1) | 0.04 | OrthoFinder output from all 47 species | |
| MA_55967g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_656915g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_82595g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| MA_956160g0010 | No alias | Pentatricopeptide repeat-containing protein At3g02330,... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g13951 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g18069 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02265 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13363 | MEF22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g16586 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g47021 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g57935 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63295 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63777 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30093 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g02982 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g15400 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32992 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g56302 | EMB2261 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013079 | No alias | not classified & original description: CDS=41-367 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0101.g019840 | No alias | not classified & original description: CDS=144-2663 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0264.g026932 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2163 | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g38015 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g42477 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g50428 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g39126 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g06093 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30403 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g43979 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e029450_P001 | Zm00001e029450 | Pentatricopeptide repeat-containing protein At2g46050,... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 441 | 466 |
| IPR002885 | Pentatricopeptide_repeat | 135 | 156 |
| IPR002885 | Pentatricopeptide_repeat | 234 | 258 |
| IPR002885 | Pentatricopeptide_repeat | 643 | 668 |
| IPR046848 | E_motif | 689 | 748 |
| IPR002885 | Pentatricopeptide_repeat | 568 | 616 |
| IPR002885 | Pentatricopeptide_repeat | 160 | 206 |
| IPR002885 | Pentatricopeptide_repeat | 467 | 515 |
| IPR002885 | Pentatricopeptide_repeat | 365 | 411 |
| IPR002885 | Pentatricopeptide_repeat | 263 | 311 |
| No external refs found! |
