Description : E3 ubiquitin ligase & original description: CDS=497-1888
Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G06330 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G18760 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g14801 | No alias | E3 ubiquitin ligase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g19756 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08435 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g10273 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017826001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g06920.2 | LOC_Os02g06920 | RING-v-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g01490.1 | LOC_Os04g01490 | RING-v-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g11720.1 | LOC_Os05g11720 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0096.g019306 | No alias | E3 ubiquitin ligase & original description: CDS=24-614 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08769 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e040499_P001 | Zm00001e040499 | RING-v-class E3 ligase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011016 | Znf_RING-CH | 236 | 283 |
| No external refs found! |
