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  5. Azfi_s0301.g063688

Azfi_s0301.g063688 (CRR2)


Aliases : CRR2

Description : not classified & original description: CDS=1-1323


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0301.g063688

Target Alias Description ECC score Gene Family Method Actions
Aev_g20072 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g03700 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17028 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04438 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g08105 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g02020 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g33224 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.05G039500.1 Ceric.05G039500 not classified & original description: pacid=50577997... 0.05 OrthoFinder output from all 47 species
Dcu_g05682 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g07128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03284 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000034001 MEF19 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
GSVIVT01000244001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01017996001 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
GSVIVT01021246001 DOT4 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
LOC_Os01g41650.1 LOC_Os01g41650 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Len_g04685 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g34161 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_102449g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.06 OrthoFinder output from all 47 species
MA_681272g0010 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.02 OrthoFinder output from all 47 species
MA_71104g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
MA_8678g0010 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_9415113g0010 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_95507g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Msp_g40811 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41118 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47672 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38625 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g27030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03497 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g04976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13764 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g37160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo119202 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Smo26993 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Smo91949 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Zm00001e041694_P001 Zm00001e041694 Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 219 244
IPR002885 Pentatricopeptide_repeat 190 216
IPR002885 Pentatricopeptide_repeat 322 351
No external refs found!