Azfi_s0327.g065240 (ATSYP52, SYP52)


Aliases : ATSYP52, SYP52

Description : Qc-type SYP5-group component of SNARE membrane fusion complex & original description: CDS=140-763


Gene families : OG0001545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001545_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0327.g065240

Target Alias Description ECC score Gene Family Method Actions
Adi_g052524 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Aop_g09567 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aspi01Gene13580.t1 ATSYP52, SYP52,... Qc-type SYP5-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Ceric.32G008200.1 ATSYP52, SYP52,... Qc-type SYP5-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Dde_g01195 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Ehy_g02128 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
GSVIVT01002017001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Len_g29175 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Lfl_g41096 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014963 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Spa_g30439 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0019781 NEDD8 activating enzyme activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA

No InterPro domains available for this sequence

No external refs found!