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  5. Azfi_s0335.g065535

Azfi_s0335.g065535


Description : regulatory factor *(CURT) of thylakoid grana stacking & original description: CDS=172-573


Gene families : OG0000444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000444_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0335.g065535
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272260 PTAC8, TMP14,... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.02 OrthoFinder output from all 47 species
AMTR_s00038p00072170 evm_27.TU.AmTr_v1... Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.05 OrthoFinder output from all 47 species
AMTR_s00135p00058090 evm_27.TU.AmTr_v1... Protein CURVATURE THYLAKOID 1D, chloroplastic... 0.04 OrthoFinder output from all 47 species
AT1G52220 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
AT2G46820 PTAC8, TMP14, PSI-P, PSAP photosystem I P subunit 0.03 OrthoFinder output from all 47 species
AT4G01150 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.06 OrthoFinder output from all 47 species
Adi_g011486 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Adi_g075200 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Adi_g075201 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Aev_g30164 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Aev_g34361 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Ala_g00864 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Als_g13228 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Als_g27752 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Aob_g02852 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Aob_g16994 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Aop_g70950 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Cba_g02293 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Ceric.05G101400.1 Ceric.05G101400 regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ceric.30G007200.1 Ceric.30G007200 regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000849.28 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g05104 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Dcu_g10196 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Dcu_g41769 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Dde_g01903 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Dde_g06506 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ehy_g19545 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Ehy_g25382 PTAC8, TMP14, PSI-P, PSAP regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ehy_g28043 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
GSVIVT01027036001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 OrthoFinder output from all 47 species
GSVIVT01027447001 PTAC8, TMP14, PSI-P, PSAP Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.04 OrthoFinder output from all 47 species
GSVIVT01028749001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.05 OrthoFinder output from all 47 species
Gb_09245 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os01g55570.1 LOC_Os01g55570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g15400.1 LOC_Os06g15400 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 OrthoFinder output from all 47 species
Len_g38767 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Lfl_g19368 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Lfl_g21744 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
MA_60075g0010 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_734271g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_904218g0010 PTAC8, TMP14, PSI-P, PSAP no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g25670.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp6g20800.1 PTAC8, TMP14, PSI-P, PSAP Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp6g20860.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g04797 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Msp_g04798 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Nbi_g06087 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Nbi_g28257 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Ore_g09525 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Ore_g27720 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Pir_g18381 PTAC8, TMP14, PSI-P, PSAP regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Pnu_g16623 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Pnu_g27450 PTAC8, TMP14, PSI-P, PSAP regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ppi_g10594 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Ppi_g18065 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Ppi_g18345 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020672 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Sam_g12952 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Smo49217 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc10g011770.4.1 Solyc10g011770 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.07 OrthoFinder output from all 47 species
Solyc11g010480.2.1 Solyc11g010480 Protein CURVATURE THYLAKOID 1D, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g05035 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Spa_g06785 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Zm00001e000193_P001 Zm00001e000193 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.04 OrthoFinder output from all 47 species
Zm00001e002212_P002 PTAC8, TMP14,... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.04 OrthoFinder output from all 47 species
Zm00001e019748_P001 Zm00001e019748 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e023473_P001 Zm00001e023473 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 OrthoFinder output from all 47 species
Zm00001e029009_P001 Zm00001e029009 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e030948_P002 Zm00001e030948 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.05 OrthoFinder output from all 47 species
Zm00001e034870_P002 PTAC8, TMP14,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025564 CAAD_dom 87 129
No external refs found!