Azfi_s0375.g067244 (PUB13, ATPUB13)

Aliases : PUB13, ATPUB13

Description : E3 ubiquitin ligase & original description: CDS=271-2382

Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0375.g067244
Cluster	HCCA: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
Als_g09257	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g31463	PUB13, ATPUB13	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01009347001	No alias	U-box domain-containing protein 4 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Pnu_g16896	PUB13, ATPUB13	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Pnu_g33917	PUB8, B80	E3 ubiquitin ligase *(PUB8) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005097	No alias	not classified & original description: CDS=1-2154	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	HCCA
MF	GO:0019208	phosphatase regulator activity	IEP	HCCA
MF	GO:0019888	protein phosphatase regulator activity	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
CC	GO:1903293	phosphatase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	493	530
IPR000225	Armadillo	533	571
IPR000225	Armadillo	450	489
IPR003613	Ubox_domain	335	405

External Links

No external refs found!