Aliases : VAC1, ECB2, ATECB2
Description : not classified & original description: CDS=1-2229
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g002434 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g021587 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036845 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g058262 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g066134 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g069101 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g089039 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g101185 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g14128 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18767 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27006 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g32957 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04906 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08782 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g33579 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34713.t1 | Aspi01Gene34713 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene54625.t1 | Aspi01Gene54625 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene60521.t1 | Aspi01Gene60521 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene65851.t1 | Aspi01Gene65851 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05323 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g06497 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07757 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g10344 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g15334 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19060 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19896 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19911 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g22397 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29527 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29703 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29960 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34537 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34773 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67895 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g71783 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g73650 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G069100.1 | Ceric.10G069100 | not classified & original description: pacid=50612724... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g02827 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g19091 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g19078 | EMB2261 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g50115 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g51775 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g16795 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22168 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26885 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19160 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01038381001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g38580.1 | EMB2261, LOC_Os03g38580 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g14450.1 | LOC_Os04g14450 | Pentatricopeptide repeat-containing protein At4g14820... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g03808 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54679 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g38041 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g01790.1 | No alias | ssDNA-binding protein (OSB) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g23168 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28097 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28341 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g29202 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g41127 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g46446 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g05418 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12523 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23569 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g32114 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06456 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g15400 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07175 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07455 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29373 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36269 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g119120.3.1 | Solyc03g119120 | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g016540.2.1 | Solyc04g016540 | Pentatricopeptide repeat-containing protein At2g39620... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g082870.1.1 | Solyc04g082870 | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g00965 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g35061 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g43907 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029819_P003 | CRR22, Zm00001e029819 | RNA editing factor (CRR22) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e030605_P001 | Zm00001e030605 | Pentatricopeptide repeat-containing protein At1g31430... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | HCCA |
| BP | GO:0000271 | polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
| MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | HCCA |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004659 | prenyltransferase activity | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | HCCA |
| BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| MF | GO:0008318 | protein prenyltransferase activity | IEP | HCCA |
| BP | GO:0009250 | glucan biosynthetic process | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0018342 | protein prenylation | IEP | HCCA |
| BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
| BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
| MF | GO:0070403 | NAD+ binding | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097354 | prenylation | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 51 | 79 |
| IPR002885 | Pentatricopeptide_repeat | 633 | 656 |
| IPR002885 | Pentatricopeptide_repeat | 432 | 452 |
| IPR002885 | Pentatricopeptide_repeat | 329 | 351 |
| IPR002885 | Pentatricopeptide_repeat | 458 | 504 |
| IPR002885 | Pentatricopeptide_repeat | 253 | 300 |
| IPR002885 | Pentatricopeptide_repeat | 559 | 606 |
| IPR002885 | Pentatricopeptide_repeat | 356 | 403 |
| IPR002885 | Pentatricopeptide_repeat | 153 | 199 |
| No external refs found! |
