Azfi_s0405.g068388

Description : component *(cS23) of small plastid ribosomal-subunit proteome & original description: CDS=1-2631

Gene families : OG0003343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003343_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s0405.g068388

Target	Alias	Description	ECC score	Gene Family Method
Ala_g00515	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Als_g28969	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Aob_g07615	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Aob_g18441	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Aspi01Gene40608.t1	Aspi01Gene40608	component *(cS23) of small plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Aspi01Gene46394.t1	Aspi01Gene46394	component *(cS23) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Cba_g17074	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.01	OrthoFinder output from all 47 species
Cba_g32123	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.29G082200.1	Ceric.29G082200	component *(cS23) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Dcu_g00469	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Dcu_g05305	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
GSVIVT01031053001	No alias	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
Gb_30016	No alias	component psPSRP3 of small ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
LOC_Os04g38750.1	LOC_Os04g38750	component psPSRP3 of small ribosomal subunit proteome	0.04	OrthoFinder output from all 47 species
Len_g12700	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Lfl_g39341	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_10432955g0010	No alias	component psPSRP3 of small ribosomal subunit proteome	0.05	OrthoFinder output from all 47 species
MA_19834g0010	No alias	component psPSRP3 of small ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Ore_g05910	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Pir_g18227	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Pp3c6_19070V3.1	Pp3c6_19070	Ribosomal protein PSRP-3/Ycf65	0.01	OrthoFinder output from all 47 species
Ppi_g21764	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Sam_g23730	No alias	component *(cS23) of small plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Solyc03g034190.3.1	Solyc03g034190	component psPSRP3 of small ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	HCCA
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0015994	chlorophyll metabolic process	IEP	HCCA
BP	GO:0015995	chlorophyll biosynthetic process	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
BP	GO:0042440	pigment metabolic process	IEP	HCCA
BP	GO:0046148	pigment biosynthetic process	IEP	HCCA
MF	GO:0046406	magnesium protoporphyrin IX methyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006924	Ribosomal_PSRP3/Ycf65	821	867

External Links

No external refs found!

Azfi_s0405.g068388

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation