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  5. Azfi_s0460.g072055

Azfi_s0460.g072055 (AGO1)


Aliases : AGO1

Description : miRNA recruiting factor (AGO) of RNA-induced silencing complex (RISC) assembly & original description: CDS=52-4212


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0460.g072055
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00203090 AGO4, OCP11,... Chromatin organisation.DNA methylation.canonical... 0.06 OrthoFinder output from all 47 species
AMTR_s00058p00069070 AGO7, ZIP,... Chromatin organisation.DNA methylation.canonical... 0.04 OrthoFinder output from all 47 species
AMTR_s00122p00122810 PNH, AGO10, ZLL,... Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
AT2G27040 AGO4, OCP11 Argonaute family protein 0.04 OrthoFinder output from all 47 species
AT2G27880 AGO5 Argonaute family protein 0.03 OrthoFinder output from all 47 species
AT5G21030 No alias PAZ domain-containing protein / piwi domain-containing protein 0.03 OrthoFinder output from all 47 species
AT5G21150 AGO9 Argonaute family protein 0.03 OrthoFinder output from all 47 species
AT5G43810 PNH, AGO10, ZLL Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.05 OrthoFinder output from all 47 species
Adi_g013023 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Aev_g13111 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Ala_g34221 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06375 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g58865 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Aop_g05330 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Aop_g08146 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Aop_g18592 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59574.t1 AGO1, Aspi01Gene59574 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Aspi01Gene61220.t1 AGO1, Aspi01Gene61220 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71412.t1 AGO9, Aspi01Gene71412 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07250 PNH, AGO10, ZLL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16425 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Cba_g16426 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77990 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.6 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Dac_g09447 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g22733 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Dac_g29067 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Dac_g39598 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Dcu_g18764 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
Dcu_g48433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37805 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Dde_g50313 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
Ehy_g18181 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.05 OrthoFinder output from all 47 species
GSVIVT01015464001 PNH, AGO10, ZLL Chromatin organisation.DNA methylation.canonical... 0.04 OrthoFinder output from all 47 species
GSVIVT01025868001 AGO4, OCP11 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
GSVIVT01031430001 AGO5 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
GSVIVT01033726001 AGO5 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
GSVIVT01037488001 AGO4, OCP11 Chromatin organisation.DNA methylation.canonical... 0.04 OrthoFinder output from all 47 species
LOC_Os02g58490.1 AGO1, LOC_Os02g58490 RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
LOC_Os03g33650.1 AGO7, ZIP, LOC_Os03g33650 Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os04g47870.1 AGO1, LOC_Os04g47870 RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
LOC_Os06g39640.1 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.04 OrthoFinder output from all 47 species
LOC_Os06g51310.2 AGO1, LOC_Os06g51310 RIS-Complex miRNA recruiting factor (AGO1) 0.08 OrthoFinder output from all 47 species
Len_g08893 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
Lfl_g35792 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10427420g0010 AGO1 Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
MA_123150g0010 AGO7, ZIP siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.02 OrthoFinder output from all 47 species
MA_161177g0010 AGO7, ZIP Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp1g18110.1 AGO1 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
Msp_g13472 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Msp_g14613 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g21068 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Nbi_g40097 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15671 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Ppi_g18600 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Solyc01g010970.3.1 AGO7, ZIP, Solyc01g010970 Protein argonaute 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc09g082830.4.1 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.07 OrthoFinder output from all 47 species
Tin_g08802 AGO1 regulatory protein *(AGO7) of transacTing siRNA pathway... 0.03 OrthoFinder output from all 47 species
Zm00001e007233_P001 AGO1, Zm00001e007233 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
Zm00001e037347_P002 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.05 OrthoFinder output from all 47 species
Zm00001e041452_P004 AGO1, Zm00001e041452 RIS-Complex miRNA recruiting factor (AGO1) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030026 cellular manganese ion homeostasis IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR032473 Argonaute_Mid_dom 911 987
IPR032474 Argonaute_N 491 639
IPR014811 ArgoL1 649 699
IPR003165 Piwi 1003 1330
IPR032472 ArgoL2 854 900
IPR003100 PAZ_dom 713 842
No external refs found!