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  5. Azfi_s0470.g072895

Azfi_s0470.g072895


Description : not classified & original description: CDS=1-1518


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0470.g072895

Target Alias Description ECC score Gene Family Method Actions
Adi_g003303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005730 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098886 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06681 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16347 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05649 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07376 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07796 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g28061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10721g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_184088g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
MA_6329g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Nbi_g05303 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37474 LOI1, MEF11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32582 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01026 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15003 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g23094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17174 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g48074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034478_P001 Zm00001e034478 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
Zm00001e039394_P003 Zm00001e039394 Pentatricopeptide repeat-containing protein At5g04780,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0009254 peptidoglycan turnover IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0030203 glycosaminoglycan metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 172 202
IPR002885 Pentatricopeptide_repeat 245 270
IPR002885 Pentatricopeptide_repeat 413 436
IPR002885 Pentatricopeptide_repeat 273 302
IPR002885 Pentatricopeptide_repeat 375 404
IPR002885 Pentatricopeptide_repeat 144 166
IPR002885 Pentatricopeptide_repeat 446 468
IPR002885 Pentatricopeptide_repeat 67 116
IPR002885 Pentatricopeptide_repeat 337 368
No external refs found!