Aliases : TPL, WSIP1
Description : transcriptional co-repressor *(TPL/TPR) & original description: CDS=1-3699
Gene families : OG0000427 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000427_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Azfi_s0578.g078268 | |
| Cluster | HCCA: Cluster_71 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G15750 | TPL, WSIP1 | Transducin family protein / WD-40 repeat family protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g012443 | TPL, WSIP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g117102 | TPL, WSIP1 | transcriptional co-repressor *(TPL/TPR) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g05875 | TPL, WSIP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04614 | TPL, WSIP1 | transcriptional co-repressor *(TPL/TPR) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.08G073000.1 | TPL, WSIP1,... | transcriptional co-repressor *(TPL/TPR) & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017487001 | TPL, WSIP1 | RNA biosynthesis.transcriptional repression.TPL/TPR... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g56913 | TPL, WSIP1 | transcriptional co-repressor *(TPL/TPR) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc08g076030.3.1 | TPL, WSIP1,... | transcriptional repressor (TPL). transcriptional... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | HCCA |
| BP | GO:0006265 | DNA topological change | IEP | HCCA |
| CC | GO:0030684 | preribosome | IEP | HCCA |
| CC | GO:0032040 | small-subunit processome | IEP | HCCA |
| BP | GO:0071103 | DNA conformation change | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| No external refs found! |
