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  5. Azfi_s0580.g078305

Azfi_s0580.g078305


Description : not classified & original description: CDS=60-3857


Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0580.g078305
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Adi_g107993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11422 No alias RNA helicase *(Prp22) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020531.53 EMB3011 Pre-mRNA-splicing factor ATP-dependent RNA helicase... 0.02 OrthoFinder output from all 47 species
Cre08.g358563 No alias Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.03 OrthoFinder output from all 47 species
Dcu_g20664 No alias RNA helicase Prp43 of Intron-Lariat Spliceosome complex... 0.04 OrthoFinder output from all 47 species
Dcu_g42294 No alias RNA helicase Prp43 of Intron-Lariat Spliceosome complex... 0.04 OrthoFinder output from all 47 species
Dde_g07695 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g14594 ESP3, EMB2733 RNA helicase *(Prp2) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09738 ESP3, EMB2733 RNA helicase *(Prp2) & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g17320.1 No alias Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.04 OrthoFinder output from all 47 species
Mp7g03460.1 EMB3011 RNA helicase (Prp16) 0.02 OrthoFinder output from all 47 species
Ore_g17219 No alias RNA helicase Prp43 of Intron-Lariat Spliceosome complex... 0.03 OrthoFinder output from all 47 species
Pp3c24_70V3.1 Pp3c24_70 RNA helicase family protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0208.g025850 ESP3, EMB2733 not classified & original description: CDS=1-522 0.04 OrthoFinder output from all 47 species
Sam_g25079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g017700.2.1 ESP3, EMB2733,... RNA helicase (Prp2) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 310 376
IPR007502 Helicase-assoc_dom 998 1086
IPR011545 DEAD/DEAH_box_helicase_dom 613 762
IPR001650 Helicase_C 806 936
IPR011709 DEAD-box_helicase_OB_fold 1144 1219
No external refs found!