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  5. Azfi_s0678.g081838

Azfi_s0678.g081838 (TUB6)


Aliases : TUB6

Description : not classified & original description: CDS=1-1224


Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s0678.g081838
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00190040 TUB8,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
AMTR_s00032p00056500 TUB8,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
AT5G12250 TUB6 beta-6 tubulin 0.03 OrthoFinder output from all 47 species
AT5G62700 TUB3 tubulin beta chain 3 0.02 OrthoFinder output from all 47 species
Adi_g055550 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Adi_g075879 TUB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g103981 TUB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105533 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Aev_g20343 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Ala_g16994 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Als_g10860 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Als_g33099 TUB6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63108 TUB7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08895 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63081.t1 TUB6, Aspi01Gene63081 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.06G048500.1 TUB2, Ceric.06G048500 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dcu_g06899 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Ehy_g29388 TUB5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_33450 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Lfl_g06065 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
MA_10435130g0010 TUB6 Tubulin beta-1 chain OS=Zea mays (sp|p18025|tbb1_maize : 310.0) 0.03 OrthoFinder output from all 47 species
MA_8465279g0010 TUB6 Tubulin beta-1 chain OS=Zea mays (sp|p18025|tbb1_maize : 126.0) 0.02 OrthoFinder output from all 47 species
MA_9451675g0010 TUB2 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Msp_g09508 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Nbi_g06967 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Nbi_g18799 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Pnu_g04503 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ppi_g27529 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008095 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Sam_g08880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16934 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Sam_g40899 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Smo230116 TUB6 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Smo231661 TUB2 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 OrthoFinder output from all 47 species
Solyc10g085020.3.1 TUB8, Solyc10g085020 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Tin_g05083 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Zm00001e000048_P003 TUB2, Zm00001e000048 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
Zm00001e039740_P001 TUB9, Zm00001e039740 Tubulin beta-7 chain OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Zm00001e042329_P001 TUB9, Zm00001e042329 Tubulin beta-7 chain OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006449 regulation of translational termination IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
BP GO:0045901 positive regulation of translational elongation IEP HCCA
BP GO:0045905 positive regulation of translational termination IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 107 318
No external refs found!