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  5. Azfi_s1721.g106131

Azfi_s1721.g106131


Description : not classified & original description: CDS=1-2793


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s1721.g106131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00230160 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AMTR_s00058p00187000 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g33760... 0.04 OrthoFinder output from all 47 species
AT2G37320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g025455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01267.t1 CRR2, Aspi01Gene01267 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02630.t1 CRK8, Aspi01Gene02630 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10966.t1 Aspi01Gene10966 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21022.t1 Aspi01Gene21022 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24967.t1 Aspi01Gene24967 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27421.t1 Aspi01Gene27421 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53169.t1 Aspi01Gene53169 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57232.t1 Aspi01Gene57232 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64343.t1 Aspi01Gene64343 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70663.t1 Aspi01Gene70663 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0027.g023505 No alias not classified & original description: CDS=32-2620 0.06 OrthoFinder output from all 47 species
Azfi_s0073.g037173 No alias not classified & original description: CDS=1-2688 0.05 OrthoFinder output from all 47 species
Cba_g44516 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g60651 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.16G072300.1 Ceric.16G072300 not classified & original description: pacid=50590183... 0.05 OrthoFinder output from all 47 species
Ceric.18G049200.1 Ceric.18G049200 not classified & original description: pacid=50621468... 0.04 OrthoFinder output from all 47 species
Dac_g18582 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07723 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g03935 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04879 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19625 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22172 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22595 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28398 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g28844 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g34076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g40646 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g41697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46554 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g49993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06009 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021403001 No alias Pentatricopeptide repeat-containing protein At3g14730... 0.05 OrthoFinder output from all 47 species
Gb_38938 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Len_g33779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10338179g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
Msp_g17736 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g26486 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g05580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22409 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32824 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16135 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17865 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g25064 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25239 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30607 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000561 No alias not classified & original description: CDS=191-3046 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012739 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022243 No alias not classified & original description: CDS=1-1908 0.03 OrthoFinder output from all 47 species
Sam_g25339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g45659 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26871 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g39862 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 612 671
IPR002885 Pentatricopeptide_repeat 725 771
IPR002885 Pentatricopeptide_repeat 80 127
IPR002885 Pentatricopeptide_repeat 285 331
IPR002885 Pentatricopeptide_repeat 386 432
IPR002885 Pentatricopeptide_repeat 183 231
IPR002885 Pentatricopeptide_repeat 487 534
IPR002885 Pentatricopeptide_repeat 562 587
IPR002885 Pentatricopeptide_repeat 700 718
IPR002885 Pentatricopeptide_repeat 799 823
IPR002885 Pentatricopeptide_repeat 157 181
No external refs found!