Azfi_s1890.g107856


Description : not classified & original description: CDS=1-3162


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s1890.g107856

Target Alias Description ECC score Gene Family Method Actions
AT2G40720 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G15130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G04780 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G40405 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G61400 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g004519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30905 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g09923 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g27006 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g27260 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28240 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g30453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40270 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14876.t1 OTP80, Aspi01Gene14876 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g03367 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10642 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g74873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.26G043600.1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.30G001600.1 Ceric.30G001600 not classified & original description: pacid=50608965... 0.03 OrthoFinder output from all 47 species
Dac_g08356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19039 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g19103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g20281 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g20424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g24893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g39090.1 LOC_Os07g39090 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g04831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05268 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_121102g0010 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_39263g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
MA_785826g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Msp_g24535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09876 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18069 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13036 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g22615 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14863 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10359 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 889 912
IPR002885 Pentatricopeptide_repeat 277 299
IPR002885 Pentatricopeptide_repeat 813 859
IPR002885 Pentatricopeptide_repeat 201 247
IPR002885 Pentatricopeptide_repeat 916 961
IPR002885 Pentatricopeptide_repeat 507 553
IPR002885 Pentatricopeptide_repeat 97 144
IPR002885 Pentatricopeptide_repeat 711 757
IPR002885 Pentatricopeptide_repeat 303 349
No external refs found!