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  5. Ehy_g05480

Ehy_g05480 (HCHIB, B-CHI,...)


Aliases : HCHIB, B-CHI, ATHCHIB, PR-3, PR3, CHI-B

Description : basic chitinase *(CHIB) & original description: none


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g05480
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AT3G12500 HCHIB, B-CHI,... basic chitinase 0.03 OrthoFinder output from all 47 species
Adi_g115474 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38491 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01038108001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_20766 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_114934g0010 ATEP3, EP3,... Chitinase 4 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
MA_295712g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_36141g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Nbi_g20262 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g34620 ATEP3, EP3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31117 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0247.g026716 ATEP3, EP3,... not classified & original description: CDS=1-465 0.04 OrthoFinder output from all 47 species
Smo419028 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc02g082920.4.1 HCHIB, B-CHI,... Acidic 26 kDa endochitinase OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Solyc02g082930.3.1 HCHIB, B-CHI,... Acidic 27 kDa endochitinase OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Solyc07g009530.1.1 HCHIB, B-CHI,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc10g055810.2.1 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA Interproscan
BP GO:0006032 chitin catabolic process IEA Interproscan
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001002 Chitin-bd_1 30 68
IPR000726 Glyco_hydro_19_cat 100 331
No external refs found!