Azfi_s2495.g111841 (DDB1A)

Aliases : DDB1A

Description : core adaptor component *(DDB1) of CUL4-based E3 ubiquitin ligase complexes & original description: CDS=1-3465

Gene families : OG0004030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004030_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Azfi_s2495.g111841
Cluster	HCCA: Cluster_67

Target	Alias	Description	ECC score	Gene Family Method
AT4G05420	DDB1A	damaged DNA binding protein 1A	0.02	OrthoFinder output from all 47 species
Adi_g114746	DDB1A	core adaptor component *(DDB1) of CUL4-based E3...	0.02	OrthoFinder output from all 47 species
Dde_g02981	DDB1A	core adaptor component *(DDB1) of CUL4-based E3...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018846	Cleavage/polyA-sp_fac_asu_N	142	603
IPR004871	Cleavage/polyA-sp_fac_asu_C	811	1123

External Links

No external refs found!