Azfi_s2556.g112165 (ATHMG, HMG, SSRP1, NFD)


Aliases : ATHMG, HMG, SSRP1, NFD

Description : component *(SSRP) of FACT histone chaperone complex & original description: CDS=1-783


Gene families : OG0003187 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003187_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s2556.g112165
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene45493.t1 ATHMG, HMG,... component *(SSRP) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Nbi_g13133 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Ppi_g05865 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017158 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
InterPro domains Description Start Stop
IPR035417 SSRP1/POB3_N 9 99
IPR024954 SSRP1_DD 108 177
No external refs found!