Azfi_s2721.g112781


Description : helicase UAP56 & original description: CDS=1-1683


Gene families : OG0002123 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002123_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s2721.g112781

Target Alias Description ECC score Gene Family Method Actions
Adi_g069281 No alias helicase UAP56 & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12256 No alias helicase UAP56 & original description: none 0.03 OrthoFinder output from all 47 species
Gb_14863 No alias RNA helicase (Sub2). helicase component UAP56 of... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 449 537
IPR011545 DEAD/DEAH_box_helicase_dom 298 421
No external refs found!