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  5. Azfi_s4317.g118723

Azfi_s4317.g118723


Description : ssDNA-binding protein *(OSB) & original description: CDS=173-1369


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Azfi_s4317.g118723

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene03412.t2 Aspi01Gene03412 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42015.t1 Aspi01Gene42015 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56416.t1 CRR22, Aspi01Gene56416 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05214 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01035491001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.07 OrthoFinder output from all 47 species
LOC_Os01g11470.1 LOC_Os01g11470 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Len_g05268 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g31919 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g16805 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g20126 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g06094 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017968 No alias not classified & original description: CDS=1-2673 0.1 OrthoFinder output from all 47 species
Smo111894 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.07 OrthoFinder output from all 47 species
Tin_g07561 VAC1, ECB2, ATECB2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g27046 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e023289_P001 Zm00001e023289 Pentatricopeptide repeat-containing protein At1g31920... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 344 369
IPR002885 Pentatricopeptide_repeat 201 229
IPR002885 Pentatricopeptide_repeat 372 394
No external refs found!