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  5. Sacu_v1.1_s0001.g000048

Sacu_v1.1_s0001.g000048


Description : not classified & original description: CDS=1-1572


Gene families : OG0000352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000048
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00258400 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G05280 No alias Protein of unknown function (DUF604) 0.02 OrthoFinder output from all 47 species
Adi_g000658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07324 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0012.g012981 No alias not classified & original description: CDS=77-1648 0.03 OrthoFinder output from all 47 species
Ehy_g04828 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019400001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01019725001 No alias No description available 0.07 OrthoFinder output from all 47 species
GSVIVT01030630001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_12418 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_31866 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g31210.1 LOC_Os02g31210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g16290.1 LOC_Os03g16290 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g30868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_1154988g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_12294g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_3705655g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7477879g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g06254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42679 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g15705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09207 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g075560.2.1 Solyc06g075560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g065390.3.1 Solyc11g065390 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g065400.2.1 Solyc11g065400 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc11g065470.2.1 Solyc11g065470 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g24720 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e007164_P001 Zm00001e007164 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e038263_P001 Zm00001e038263 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901642 nucleoside transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006740 DUF604 243 498
No external refs found!