Sacu_v1.1_s0001.g000290 (SGR4, ZIG1, VTI1A,...)

Aliases : SGR4, ZIG1, VTI1A, ATVTI11, VTI11, ZIG, ATVTI1A

Description : Qb-type VTI-group component of SNARE membrane fusion complex & original description: CDS=340-1005

Gene families : OG0002267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002267_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0001.g000290

Target	Alias	Description	ECC score	Gene Family Method
Adi_g008512	SGR4, ZIG1,...	Qb-type VTI-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
Als_g22401	ATVTI13, VTI13	Qb-type VTI-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Aop_g25830	SGR4, ZIG1,...	Qb-type VTI-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Cre13.g577500	VTI12, VTI1B, ATVTI12	Vesicle trafficking.SNARE target membrane recognition...	0.04	OrthoFinder output from all 47 species
Dcu_g25235	SGR4, ZIG1,...	Qb-type VTI-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Ehy_g07395	ATVTI13, VTI13	Qb-type VTI-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
GSVIVT01011463001	ATVTI13, VTI13	Vesicle trafficking.SNARE target membrane recognition...	0.02	OrthoFinder output from all 47 species
LOC_Os01g37980.1	ATVTI13, VTI13,...	VTI group Qb-type SNARE protein	0.02	OrthoFinder output from all 47 species
Mp1g12970.1	SGR4, ZIG1,...	VTI group Qb-type SNARE protein	0.02	OrthoFinder output from all 47 species
Ore_g00227	SGR4, ZIG1,...	Qb-type VTI-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Tin_g06403	ATVTI13, VTI13	Qb-type VTI-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Zm00001e027750_P001	ATVTI13, VTI13,...	VTI group Qb-type SNARE protein	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004097	catechol oxidase activity	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	HCCA
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	HCCA
CC	GO:0030286	dynein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007705	Vesicle_trsprt_v-SNARE_N	12	90

External Links

No external refs found!