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  5. Sacu_v1.1_s0001.g000434

Sacu_v1.1_s0001.g000434


Description : regulatory protein *(SHOU4) involved in cellulose synthase trafficking & original description: CDS=973-2481


Gene families : OG0000929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000434

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00074p00143470 evm_27.TU.AmTr_v1... Uncharacterized membrane protein At1g16860... 0.02 OrthoFinder output from all 47 species
Ala_g02232 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Als_g01771 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Als_g15204 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Als_g49969 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Aob_g29061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G069000.1 Ceric.21G069000 not classified & original description: pacid=50602627... 0.03 OrthoFinder output from all 47 species
Dac_g01677 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Dac_g08975 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Dac_g11604 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Dde_g01576 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Ehy_g05868 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Ehy_g07030 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
LOC_Os04g51710.1 LOC_Os04g51710 SHOU4-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species
LOC_Os08g13350.1 LOC_Os08g13350 SHOU4-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species
Len_g04751 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Lfl_g15628 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Lfl_g29225 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Msp_g11445 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Nbi_g10144 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Ore_g09783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01330 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Pnu_g04537 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Ppi_g01208 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Ppi_g16981 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Sam_g16842 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Sam_g19361 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Sam_g19362 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Smo170682 No alias Uncharacterized membrane protein At1g16860... 0.02 OrthoFinder output from all 47 species
Smo438884 No alias Uncharacterized membrane protein At1g16860... 0.05 OrthoFinder output from all 47 species
Solyc12g017450.2.1 Solyc12g017450 SHOU4-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species
Spa_g16426 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Zm00001e007013_P001 Zm00001e007013 SHOU4-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species
Zm00001e022289_P002 Zm00001e022289 SHOU4-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species
Zm00001e040067_P002 Zm00001e040067 SHOU4-type cellulose synthase CSC-interactive protein 0.05 OrthoFinder output from all 47 species
Zm00001e041596_P001 Zm00001e041596 SHOU4-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR013216 Methyltransf_11 119 236
No external refs found!