Aliases : CRR2
Description : not classified & original description: CDS=1-1110
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0001.g000505 | |
| Cluster | HCCA: Cluster_61 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00272900 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00002p00266930 | OTP81 | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00031p00067070 | emb1899, EMB175, EMB166 | Pentatricopeptide repeat-containing protein At5g03800... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00038p00071780 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g26540... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00049p00210350 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00077p00031710 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g003839 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g004372 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g004508 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g022087 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g025632 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g043528 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g053631 | MEF19 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g055244 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g095207 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g101200 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g101241 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g32888 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g38690 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g41951 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07498 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g09167 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g17197 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g19009 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g20488 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24236 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g32791 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g35868 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g38174 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g06359 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g14128 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g28618 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g30199 | REME1 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g30789 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g39732 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g63751 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g23626 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27260 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g32957 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04156 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g09162 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene03740.t1 | Aspi01Gene03740 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene31476.t1 | Aspi01Gene31476 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009229 | No alias | not classified & original description: CDS=1-2601 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0015.g013865 | No alias | not classified & original description: CDS=1-1626 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g016204 | OTP84 | not classified & original description: CDS=27-2648 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g023783 | No alias | not classified & original description: CDS=1-2922 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0045.g029773 | No alias | not classified & original description: CDS=1-489 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0045.g029802 | No alias | not classified & original description: CDS=1-2208 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0051.g031470 | No alias | not classified & original description: CDS=1-1512 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0250.g060212 | CRR22 | not classified & original description: CDS=1-2343 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0471.g072918 | No alias | not classified & original description: CDS=1-3447 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g14919 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g16716 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67460 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g75327 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.09G007000.1 | Ceric.09G007000 | not classified & original description: pacid=50586983... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g44564 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g32689 | CRR22 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g43258 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g18756 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g23570 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26464 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g13146 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01036975001 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g08120.1 | OTP81, LOC_Os01g08120 | RNA editing factor (OTP81) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os01g60250.1 | LOC_Os01g60250 | Pentatricopeptide repeat-containing protein At3g14730... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g40860.1 | LOC_Os06g40860 | Pentatricopeptide repeat-containing protein At1g03540... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g04697 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18512 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05719 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06655 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07019 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g28067 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g32657 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_187514g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_23144g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.01 | OrthoFinder output from all 47 species | |
| MA_3462g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.01 | OrthoFinder output from all 47 species | |
| MA_785826g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| MA_84538g0010 | EMB2261 | Pentatricopeptide repeat-containing protein At4g13650... | 0.01 | OrthoFinder output from all 47 species | |
| MA_8893194g0010 | MEF1 | RNA editing factor (MEF1) | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g08590 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g12146 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g31269 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04955 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g04968 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g15427 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g28140 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g02370 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g33469 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g33905 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g36668 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g42313 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g02574 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02846 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03413 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g03426 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g06896 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10933 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g15855 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g17495 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g32558 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63850 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g66518 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g22601 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g26686 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06977 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g16080 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29710 | EMB2261 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g31070 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53384 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g03383 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g04999 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13791 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16371 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g19797 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g24891 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g29816 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36544 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37160 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g37186 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g38417 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g49275 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50768 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo134538 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | OrthoFinder output from all 47 species | |
| Smo136241 | EMB2758 | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g068630.1.1 | Solyc02g068630 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g076330.3.1 | CRR22, Solyc04g076330 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g053850.4.1 | Solyc06g053850 | Pentatricopeptide repeat-containing protein At4g02750... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g05652 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g15467 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g45659 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g49369 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g05207 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17154 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g26741 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g29865 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44234 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e007042_P001 | Zm00001e007042 | RNA editing factor (AEF1) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e029186_P001 | Zm00001e029186 | Pentatricopeptide repeat-containing protein At1g19720... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008097 | 5S rRNA binding | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| No external refs found! |
