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  5. Sacu_v1.1_s0001.g000561

Sacu_v1.1_s0001.g000561


Description : not classified & original description: CDS=191-3046


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000561
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00080380 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g59720,... 0.02 OrthoFinder output from all 47 species
Adi_g003785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g044762 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36101 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16831 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18871 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67897 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63349.t1 Aspi01Gene63349 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0083.g038857 No alias not classified & original description: CDS=1-2421 0.03 OrthoFinder output from all 47 species
Azfi_s0251.g060280 No alias not classified & original description: CDS=1-3180 0.02 OrthoFinder output from all 47 species
Azfi_s0768.g086029 No alias not classified & original description: CDS=1-2331 0.03 OrthoFinder output from all 47 species
Azfi_s1395.g102559 No alias not classified & original description: CDS=1-912 0.01 OrthoFinder output from all 47 species
Azfi_s1562.g104338 OTP84 not classified & original description: CDS=59-2905 0.04 OrthoFinder output from all 47 species
Azfi_s1721.g106131 No alias not classified & original description: CDS=1-2793 0.02 OrthoFinder output from all 47 species
Azfi_s2054.g108918 CRR22 not classified & original description: CDS=1-2412 0.02 OrthoFinder output from all 47 species
Cba_g22740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G069300.1 OTP86, Ceric.09G069300 not classified & original description: pacid=50588354... 0.02 OrthoFinder output from all 47 species
Ceric.28G037300.1 Ceric.28G037300 not classified & original description: pacid=50570602... 0.03 OrthoFinder output from all 47 species
Ceric.39G046500.1 Ceric.39G046500 not classified & original description: pacid=50582543... 0.01 OrthoFinder output from all 47 species
Dcu_g11455 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40867 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g04314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25445 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41493 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g12128 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g13074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35084 OTP85 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.03 OrthoFinder output from all 47 species
Msp_g14913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g41389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06311 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08599 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16442 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g31920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g41736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13573 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12264 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01154 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53022 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16206 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46568 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g52449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54422 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56147 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28890 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015440_P001 CRR22, Zm00001e015440 Pentatricopeptide repeat-containing protein At3g57430,... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR046849 Eplus_motif 831 855
IPR002885 Pentatricopeptide_repeat 646 694
IPR002885 Pentatricopeptide_repeat 445 491
IPR002885 Pentatricopeptide_repeat 546 593
IPR032867 DYW_dom 862 949
IPR002885 Pentatricopeptide_repeat 247 276
IPR002885 Pentatricopeptide_repeat 146 172
IPR002885 Pentatricopeptide_repeat 218 240
IPR002885 Pentatricopeptide_repeat 419 443
No external refs found!