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  5. Sacu_v1.1_s0001.g000635

Sacu_v1.1_s0001.g000635 (GR-RBP3)


Aliases : GR-RBP3

Description : RNA editing factor *(ORRM3) & original description: CDS=202-855


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000635

Target Alias Description ECC score Gene Family Method Actions
Adi_g014441 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g016091 ATRBP31, CP31,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022574 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05447 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24232 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00926 GR-RBP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031234 No alias not classified & original description: CDS=60-764 0.04 OrthoFinder output from all 47 species
Azfi_s0232.g059291 GRP2, ATGRP2, GR-RBP2 not classified & original description: CDS=1-585 0.03 OrthoFinder output from all 47 species
Azfi_s0254.g060439 CCR2, ATGRP7,... not classified & original description: CDS=180-692 0.04 OrthoFinder output from all 47 species
Azfi_s0468.g072856 GR-RBP4, GRP4 not classified & original description: CDS=1-582 0.04 OrthoFinder output from all 47 species
Cba_g08805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g28987 ATRZ-1A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31532 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G066000.1 Ceric.09G066000 RNA chaperone *(RZ1) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G026600.1 GR-RBP4, GRP4,... not classified & original description: pacid=50598391... 0.04 OrthoFinder output from all 47 species
Cre09.g392350 GRP2, ATGRP2, GR-RBP2 Glycine-rich RNA-binding protein 2, mitochondrial... 0.02 OrthoFinder output from all 47 species
Ehy_g14516 GR-RBP4, GRP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16014 GR-RBP4, GRP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g13620.1 LOC_Os05g13620 Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba... 0.02 OrthoFinder output from all 47 species
Len_g11735 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g12851 CCR2, ATGRP7,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32203 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00490 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10436 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23738 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17461 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29739 GR-RBP3 RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c7_3360V3.1 CCR1, GR-RBP8,... cold, circadian rhythm, and RNA binding 1 0.02 OrthoFinder output from all 47 species
Sam_g09618 No alias RNA editing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38661 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc02g088790.3.1 GR-RBP3, Solyc02g088790 RNA editing factor (ORRM) 0.03 OrthoFinder output from all 47 species
Spa_g12968 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16011 ATRZ-1A RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04956 No alias RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22300 GRP2, ATGRP2, GR-RBP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27808 GR-RBP4, GRP4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30660 GR-RBP3 RNA ediTing factor *(ORRM3) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028502_P003 Zm00001e028502 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 59 129
No external refs found!