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  5. Sacu_v1.1_s0001.g000724

Sacu_v1.1_s0001.g000724


Description : not classified & original description: CDS=90-728


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000724
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT1G77170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G49710 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g017104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067920 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087163 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099272 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17868 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18621 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55221 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14740 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44172.t1 Aspi01Gene44172 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0117.g046573 No alias not classified & original description: CDS=1-1419 0.03 OrthoFinder output from all 47 species
Cba_g05331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07505 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.23G075300.1 Ceric.23G075300 not classified & original description: pacid=50609898... 0.03 OrthoFinder output from all 47 species
Dac_g30156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030836001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os02g44480.1 LOC_Os02g44480 Pentatricopeptide repeat-containing protein At5g39350... 0.03 OrthoFinder output from all 47 species
LOC_Os03g20190.1 LOC_Os03g20190 Pentatricopeptide repeat-containing protein At1g56690,... 0.02 OrthoFinder output from all 47 species
Len_g22919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13946 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30175 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57348 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57700 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13232 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46657 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019295 No alias not classified & original description: CDS=1-1539 0.03 OrthoFinder output from all 47 species
Sam_g06304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo444974 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Solyc06g005690.3.1 Solyc06g005690 Pentatricopeptide repeat-containing protein At5g59600... 0.03 OrthoFinder output from all 47 species
Tin_g35068 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 150 195
IPR002885 Pentatricopeptide_repeat 111 147
No external refs found!