1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0001.g000796

Sacu_v1.1_s0001.g000796


Description : EC_3.2 glycosylase & original description: CDS=1-2487


Gene families : OG0001022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000796
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00125p00113140 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 OrthoFinder output from all 47 species
AT1G02640 ATBXL2, BXL2 beta-xylosidase 2 0.02 OrthoFinder output from all 47 species
AT3G19620 No alias Glycosyl hydrolase family protein 0.02 OrthoFinder output from all 47 species
Ala_g25839 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28516.t1 Aspi01Gene28516 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene53707.t1 Aspi01Gene53707 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035699 XYL4, ATBXL4 EC_3.2 glycosylase & original description: CDS=220-2613 0.04 OrthoFinder output from all 47 species
Gb_32463 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
LOC_Os01g19220.1 ATBXL2, BXL2,... bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
LOC_Os11g44950.2 ATBXL2, BXL2,... bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Lfl_g29235 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10430067g0010 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species
Mp5g02880.1 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Msp_g10167 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25216 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26394 BXL3, BX3, XYL3,... EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43289 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008480 No alias EC_3.2 glycosylase & original description: CDS=1-2670 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0220.g026144 No alias EC_3.2 glycosylase & original description: CDS=1-2409 0.05 OrthoFinder output from all 47 species
Sam_g24375 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Smo419541 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
Zm00001e037605_P001 ATBXL2, BXL2,... bifunctional alpha-L-arabinofuranosidase and... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR026891 Fn3-like 748 821
IPR002772 Glyco_hydro_3_C 438 582
IPR001764 Glyco_hydro_3_N 142 395
No external refs found!