Sacu_v1.1_s0002.g000832


Description : not classified & original description: CDS=491-2686


Gene families : OG0001166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001166_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g000832

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00248410 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aop_g35855 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0054.g033618 No alias not classified & original description: CDS=121-2442 0.04 OrthoFinder output from all 47 species
GSVIVT01035860001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_29317 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g44670.1 LOC_Os03g44670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g19530.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g24233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005259_P001 Zm00001e005259 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 19 186
No external refs found!