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  5. Sacu_v1.1_s0002.g000987

Sacu_v1.1_s0002.g000987


Description : not classified & original description: CDS=48-1502


Gene families : OG0000481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000481_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g000987
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00162390 evm_27.TU.AmTr_v1... Glutelin type-D 1 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AMTR_s00067p00027690 evm_27.TU.AmTr_v1... 11S globulin seed storage protein 2 OS=Sesamum indicum 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g011191 CRU2, CRB Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0078.g038308 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01022898001 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01022901001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01022907001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01028337001 CRU1, CRA1, ATCRA1 11S globulin subunit beta OS=Cucurbita maxima 0.03 OrthoFinder output from all 47 species
GSVIVT01028338001 CRU3, CRC 11S globulin subunit beta OS=Cucurbita maxima 0.03 OrthoFinder output from all 47 species
MA_9853020g0010 No alias 12S seed storage protein CRD OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g18470.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g16700 CRU2, CRB Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Msp_g44561 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Pir_g15974 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g25554 No alias Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g27212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g104100.3.1 Solyc01g104100 no description available(sp|a0a222nnm9|cos1_cocnu : 83.2) 0.01 OrthoFinder output from all 47 species
Solyc09g072560.4.1 CRU1, CRA1,... 11S globulin seed storage protein 2 OS=Sesamum indicum... 0.03 OrthoFinder output from all 47 species
Solyc09g090150.4.1 CRU2, CRB, Solyc09g090150 no description available(sp|a0a1l6k371|jugn4_jugni : 418.0) 0.03 OrthoFinder output from all 47 species
Zm00001e017768_P001 Zm00001e017768 11S globulin seed storage protein 2 OS=Sesamum indicum... 0.04 OrthoFinder output from all 47 species
Zm00001e027621_P002 Zm00001e027621 Glutelin type-D 1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e038826_P001 Zm00001e038826 Glutelin type-D 1 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 319 464
IPR006045 Cupin_1 110 227
No external refs found!