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  5. Sacu_v1.1_s0002.g001038

Sacu_v1.1_s0002.g001038 (CEN2)


Aliases : CEN2

Description : calcium sensor *(CML) & original description: CDS=1-501


Gene families : OG0001195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g001038

Target Alias Description ECC score Gene Family Method Actions
Cba_g38419 CEN2 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.38G049700.1 CEN2, Ceric.38G049700 calcium sensor *(CML) & original description:... 0.02 OrthoFinder output from all 47 species
LOC_Os10g25010.1 CEN2, LOC_Os10g25010 DNA repair protein (CEN2). centrin component CEN of... 0.02 OrthoFinder output from all 47 species
MA_158316g0010 CEN2, CEN1, ATCEN2 Probable calcium-binding protein CML13 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_6362g0010 CEN2, CEN1, ATCEN2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 111 162
IPR002048 EF_hand_dom 26 88
No external refs found!