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  5. Sacu_v1.1_s0002.g001039

Sacu_v1.1_s0002.g001039 (UGE5)


Aliases : UGE5

Description : EC_5.1 racemase or epimerase & original description: CDS=1-1365


Gene families : OG0000465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g001039

Target Alias Description ECC score Gene Family Method Actions
Adi_g106654 No alias EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34879 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26218 UGE2, ATUGE2 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04467 MUR4, UXE1, HSR8 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G032300.1 UGE2, ATUGE2,... EC_5.1 racemase or epimerase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.26G017400.1 UGE5, Ceric.26G017400 EC_5.1 racemase or epimerase & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.5 UGE5 Carbohydrate metabolism.nucleotide sugar... 0.01 OrthoFinder output from all 47 species
Cre04.g214502 UGE5 Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
Dcu_g07590 MUR4, UXE1, HSR8 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11695 MUR4, UXE1, HSR8 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02301 UGE2, ATUGE2 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02322 UGE2, ATUGE2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015720001 MUR4, UXE1, HSR8 Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
LOC_Os05g51670.1 UGE2, ATUGE2,... UDP-D-glucose 4-epimerase 0.02 OrthoFinder output from all 47 species
Lfl_g12616 UGE5 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
MA_325942g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g23480.1 UGE5 UDP-D-glucose 4-epimerase 0.02 OrthoFinder output from all 47 species
Mp7g08810.1 UGE5 UDP-D-glucose 4-epimerase 0.02 OrthoFinder output from all 47 species
Nbi_g02234 MUR4, UXE1, HSR8 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43306 UGE5 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38451 No alias EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46894 No alias EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g055930.3.1 UGE2, ATUGE2,... UDP-D-glucose 4-epimerase 0.02 OrthoFinder output from all 47 species
Spa_g04491 UGE5 EC_5.1 racemase or epimerase & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e001385_P002 MUR4, UXE1,... UDP-D-xylose 4-epimerase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 75 433
No external refs found!