Sacu_v1.1_s0002.g001117


Description : not classified & original description: CDS=269-766


Gene families : OG0000461 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000461_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g001117

Target Alias Description ECC score Gene Family Method Actions
AT2G01540 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.03 OrthoFinder output from all 47 species
AT4G05330 AGD13 ARF-GAP domain 13 0.03 OrthoFinder output from all 47 species
Ceric.26G022200.1 AGD13, Ceric.26G022200 class III ARF-GAP ARF-GTPase-activating protein &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021318.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Ore_g12369 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11078 AGD12, ZAC not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015687_P004 AGD12, ZAC,... class III ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species
Zm00001e023402_P004 AGD12, ZAC,... class III ARF-GAP ARF-GTPase-activating protein 0.02 OrthoFinder output from all 47 species
Zm00001e028315_P003 Zm00001e028315 class III ARF-GAP ARF-GTPase-activating protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0030131 clathrin adaptor complex IEP HCCA
MF GO:0031491 nucleosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 6 94
No external refs found!