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  5. Sacu_v1.1_s0002.g001174

Sacu_v1.1_s0002.g001174 (TTL1)


Aliases : TTL1

Description : not classified & original description: CDS=524-3337


Gene families : OG0000939 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000939_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g001174
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00174p00014780 TTL3, VIT,... Inactive TPR repeat-containing thioredoxin TTL3... 0.03 OrthoFinder output from all 47 species
AT1G78120 TPR12 Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
Aev_g37899 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06190 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11846 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26452 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32635 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40020 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10921 TTL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g12483 TTL1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g14242 TTL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.02G063800.1 TTL1, Ceric.02G063800 not classified & original description: pacid=50585538... 0.03 OrthoFinder output from all 47 species
Dac_g01798 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22590 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46240 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04986 TTL3, VIT not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08577 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_36115 TTL1 scaffold protein (TTL) of brassinosteroid signalling 0.02 OrthoFinder output from all 47 species
LOC_Os05g11990.1 TTL1, LOC_Os05g11990 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os05g50990.1 TTL4, LOC_Os05g50990 scaffold protein (TTL) of brassinosteroid signalling 0.02 OrthoFinder output from all 47 species
Len_g09795 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18412 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10426265g0010 TTL1 scaffold protein (TTL) of brassinosteroid signalling 0.03 OrthoFinder output from all 47 species
Msp_g35116 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07534 TTL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g09362 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21517 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29036 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44638 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01359 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02414 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06996 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17078 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0270.g027013 TTL1 not classified & original description: CDS=784-3654 0.04 OrthoFinder output from all 47 species
Sam_g13777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo168306 TTL1 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc04g055000.3.1 TPR14, Solyc04g055000 TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Spa_g04571 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09257 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16173 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10854 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020701_P001 TTL1, Zm00001e020701 scaffold protein (TTL) of brassinosteroid signalling 0.02 OrthoFinder output from all 47 species
Zm00001e026052_P001 TTL1, Zm00001e026052 scaffold protein (TTL) of brassinosteroid signalling 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0043138 3'-5' DNA helicase activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 847 929
IPR019734 TPR_repeat 482 509
No external refs found!