Sacu_v1.1_s0003.g001656


Description : not classified & original description: CDS=1-1512


Gene families : OG0002164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002164_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0003.g001656

Target Alias Description ECC score Gene Family Method Actions
Ala_g09057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g52779 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g11807 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.11G040000.1 Ceric.11G040000 not classified & original description: pacid=50595307... 0.04 OrthoFinder output from all 47 species
Ceric.30G013200.1 Ceric.30G013200 not classified & original description: pacid=50609199... 0.05 OrthoFinder output from all 47 species
Dac_g09072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10503 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g13935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01003308001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01030507001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os08g41520.1 LOC_Os08g41520 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Mp1g27230.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g27065 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002384 No alias not classified & original description: CDS=1-2250 0.04 OrthoFinder output from all 47 species
Solyc02g081180.2.1 Solyc02g081180 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!