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  5. Sacu_v1.1_s0003.g001909

Sacu_v1.1_s0003.g001909


Description : not classified & original description: CDS=1-747


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0003.g001909

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00212610 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00099p00033600 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G39650 No alias Protein of unknown function (DUF506) 0.02 OrthoFinder output from all 47 species
Adi_g056039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g39953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27252.t1 Aspi01Gene27252 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G087600.1 Ceric.13G087600 not classified & original description: pacid=50635474... 0.04 OrthoFinder output from all 47 species
Ceric.17G023400.1 Ceric.17G023400 not classified & original description: pacid=50618778... 0.03 OrthoFinder output from all 47 species
Ceric.27G003000.1 Ceric.27G003000 not classified & original description: pacid=50605227... 0.04 OrthoFinder output from all 47 species
Ceric.38G003400.1 Ceric.38G003400 not classified & original description: pacid=50580583... 0.01 OrthoFinder output from all 47 species
Dac_g04659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04691 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g29952 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17287 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01005210001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01006248001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01018080001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_34690 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g54340.1 LOC_Os01g54340 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g44300.1 LOC_Os05g44300 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g08390.2 LOC_Os07g08390 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g28210.1 LOC_Os10g28210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g11821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g31160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_32290g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_41471g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g30242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10620 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g41587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003040 No alias not classified & original description: CDS=1-1485 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008363 No alias not classified & original description: CDS=285-1409 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014461 No alias not classified & original description: CDS=1-1647 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020224 No alias not classified & original description: CDS=806-2086 0.04 OrthoFinder output from all 47 species
Solyc09g057760.4.1 Solyc09g057760 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g25859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000474_P001 Zm00001e000474 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e005992_P006 Zm00001e005992 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e011452_P001 Zm00001e011452 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 33 183
No external refs found!