Sacu_v1.1_s0003.g002021 (LAX2)


Aliases : LAX2

Description : auxin transporter *(AUX/LAX) & original description: CDS=1-930


Gene families : OG0000450 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000450_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0003.g002021

Target Alias Description ECC score Gene Family Method Actions
Ala_g19333 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33370 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34109 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06385 LAX1 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15464 LAX1 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47932 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04772 LAX1 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008917001 LAX3 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
GSVIVT01033986001 PIR1, MAP1, AUX1, WAV5 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
LOC_Os05g37470.1 PIR1, MAP1,... auxin transporter (AUX/LAX) 0.04 OrthoFinder output from all 47 species
LOC_Os11g06820.1 LAX3, LOC_Os11g06820 auxin transporter (AUX/LAX) 0.02 OrthoFinder output from all 47 species
MA_10293595g0010 PIR1, MAP1, AUX1, WAV5 auxin transporter (AUX/LAX) 0.02 OrthoFinder output from all 47 species
MA_10432781g0010 LAX1 auxin transporter (AUX/LAX) 0.03 OrthoFinder output from all 47 species
Msp_g48312 LAX1 auxin transporter *(AUX/LAX) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27241 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g00627 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25386 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28231 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g14030 LAX2 auxin transporter *(AUX/LAX) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g26447 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c19_12670V3.1 Pp3c19_12670 Transmembrane amino acid transporter family protein 0.01 OrthoFinder output from all 47 species
Ppi_g13555 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31670 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g06764 LAX1 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019235_P001 LAX1, Zm00001e019235 auxin transporter (AUX/LAX) 0.02 OrthoFinder output from all 47 species
Zm00001e024497_P001 LAX3, Zm00001e024497 auxin transporter (AUX/LAX) 0.02 OrthoFinder output from all 47 species
Zm00001e031745_P002 LAX1, Zm00001e031745 auxin transporter (AUX/LAX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 27 308
No external refs found!