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  5. Sacu_v1.1_s0004.g002103

Sacu_v1.1_s0004.g002103


Description : ROP-activating protein *(RopGAP) & original description: CDS=89-1213


Gene families : OG0000915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000915_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0004.g002103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00091880 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00129680 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
AT1G08340 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.04 OrthoFinder output from all 47 species
AT4G03100 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.04 OrthoFinder output from all 47 species
Aspi01Gene05177.t2 Aspi01Gene05177 ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06670.t1 Aspi01Gene06670 ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g025995 No alias ROP-activating protein *(RopGAP) & original description:... 0.05 OrthoFinder output from all 47 species
GSVIVT01033865001 No alias Multi-process regulation.Rop GTPase regulatory... 0.05 OrthoFinder output from all 47 species
LOC_Os02g45600.1 LOC_Os02g45600 ROP-activating protein (RopGAP) 0.05 OrthoFinder output from all 47 species
LOC_Os04g48790.1 LOC_Os04g48790 ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species
LOC_Os07g22580.1 LOC_Os07g22580 ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species
LOC_Os11g05540.1 LOC_Os11g05540 ROP-activating protein (RopGAP) 0.01 OrthoFinder output from all 47 species
Len_g13298 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436113g0010 No alias ROP-activating protein (RopGAP) 0.02 OrthoFinder output from all 47 species
Ppi_g30150 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02926 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g084450.4.1 Solyc06g084450 ROP-activating protein (RopGAP) 0.05 OrthoFinder output from all 47 species
Solyc09g009970.3.1 Solyc09g009970 ROP-activating protein (RopGAP) 0.02 OrthoFinder output from all 47 species
Spa_g12214 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17013 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007181_P002 Zm00001e007181 ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species
Zm00001e033341_P001 Zm00001e033341 ROP-activating protein (RopGAP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000198 RhoGAP_dom 65 199
IPR000095 CRIB_dom 2 30
No external refs found!