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  5. Sacu_v1.1_s0004.g002243

Sacu_v1.1_s0004.g002243 (YCF10)


Aliases : YCF10

Description : regulatory protein *(YCF10) of non-photochemical quenching & original description: CDS=1-426


Gene families : OG0002952 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002952_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0004.g002243
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
ATCG00530 YCF10 CemA-like proton extrusion protein-related 0.17 OrthoFinder output from all 47 species
Aev_g16178 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.15 OrthoFinder output from all 47 species
Ala_g06422 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Als_g20581 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.07 OrthoFinder output from all 47 species
Aob_g35850 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.06 OrthoFinder output from all 47 species
Ceric.02G014600.1 YCF10, Ceric.02G014600 regulatory protein *(YCF10) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Ceric.05G050100.1 YCF10, Ceric.05G050100 regulatory protein *(YCF10) of non-photochemical... 0.12 OrthoFinder output from all 47 species
Ceric.16G018200.1 YCF10, Ceric.16G018200 regulatory protein *(YCF10) of non-photochemical... 0.12 OrthoFinder output from all 47 species
Ceric.38G006900.1 YCF10, Ceric.38G006900 regulatory protein *(YCF10) of non-photochemical... 0.12 OrthoFinder output from all 47 species
Dcu_g22332 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.09 OrthoFinder output from all 47 species
GSVIVT01029875001 YCF10 Chloroplast envelope membrane protein OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
GSVIVT01030620001 YCF10 Chloroplast envelope membrane protein OS=Vitis vinifera 0.08 OrthoFinder output from all 47 species
GSVIVT01037398001 YCF10 Chloroplast envelope membrane protein OS=Manihot esculenta 0.05 OrthoFinder output from all 47 species
Gb_18347 No alias Chloroplast envelope membrane protein OS=Ginkgo biloba... 0.08 OrthoFinder output from all 47 species
LOC_Os02g24598.1 YCF10, LOC_Os02g24598 Chloroplast envelope membrane protein OS=Oryza sativa... 0.14 OrthoFinder output from all 47 species
Len_g13439 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Lfl_g40541 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.11 OrthoFinder output from all 47 species
Ore_g07353 YCF10 regulatory protein *(YCF10) of non-photochemical... 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008837 diaminopimelate epimerase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0047661 amino-acid racemase activity IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004282 CemA 32 112
No external refs found!