1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g05901

Ehy_g05901


Description : not classified & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g05901

Target Alias Description ECC score Gene Family Method Actions
AT3G10815 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G26400 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g012552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04416 RHC1A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09386 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g47639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27273 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene33056.t1 Aspi01Gene33056 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene63212.t1 Aspi01Gene63212 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0289.g063282 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.07G095600.1 Ceric.07G095600 not classified & original description: pacid=50626992... 0.02 OrthoFinder output from all 47 species
Dac_g21770 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21809 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Gb_14066 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g29620 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Msp_g14693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13707 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03817 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g20916 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g30903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37435 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Pir_g01325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20514 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g29139 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pnu_g08830 RHC1A RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pnu_g16883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000146 No alias not classified & original description: CDS=228-1322 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012146 No alias not classified & original description: CDS=1-969 0.02 OrthoFinder output from all 47 species
Sam_g06799 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Solyc08g075910.1.1 RHC1A, Solyc08g075910 Probable E3 ubiquitin-protein ligase RHC1A... 0.03 OrthoFinder output from all 47 species
Spa_g06543 RHC1A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003411_P001 Zm00001e003411 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e038273_P001 Zm00001e038273 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 5 34
IPR001841 Znf_RING 303 345
No external refs found!