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  5. Sacu_v1.1_s0005.g002615

Sacu_v1.1_s0005.g002615


Description : not classified & original description: CDS=1-933


Gene families : OG0000526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000526_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0005.g002615

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00257810 evm_27.TU.AmTr_v1... Remorin OS=Solanum tuberosum 0.02 OrthoFinder output from all 47 species
Adi_g102519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31141.t1 Aspi01Gene31141 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013893 No alias not classified & original description: CDS=1-894 0.03 OrthoFinder output from all 47 species
Azfi_s0217.g058560 No alias not classified & original description: CDS=1-231 0.03 OrthoFinder output from all 47 species
Dac_g12729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019785001 No alias Remorin OS=Solanum tuberosum 0.04 OrthoFinder output from all 47 species
Lfl_g02670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05871 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01503 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g035900.1.1 Solyc06g035900 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Spa_g02587 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015240_P001 Zm00001e015240 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 198 299
No external refs found!