Sacu_v1.1_s0005.g002784


Description : not classified & original description: CDS=588-1349


Gene families : OG0000217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0005.g002784
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00097690 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g056185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g41828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015103 No alias not classified & original description: CDS=51-1124 0.03 OrthoFinder output from all 47 species
Dac_g19817 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g20069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g010140.3.1 Solyc09g010140 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e015167_P001 Zm00001e015167 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035093_P001 Zm00001e035093 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004146 dihydrofolate reductase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0046653 tetrahydrofolate metabolic process IEP HCCA
BP GO:0046654 tetrahydrofolate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 48 253
No external refs found!