Description : regulatory factor *(TZF) of mRNA stress granule formation & original description: CDS=1-2430
Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G29190 | No alias | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.11G085500.1 | Ceric.11G085500 | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g03161 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g07562 | ATTZF1, ATCTH | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g04847 | SZF2, ATSZF2, ZFAR1, CZF1 | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01025263001 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g21927 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g29477 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g10809 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g29245 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g41768 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.07 | OrthoFinder output from all 47 species | |
| Ppi_g31009 | No alias | regulatory factor *(TZF) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g080260.3.1 | Solyc10g080260 | mRNA-binding regulatory factor (TZF) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| MF | GO:0046872 | metal ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:2001070 | starch binding | IEP | HCCA |
| No external refs found! |
