Sacu_v1.1_s0006.g003030


Description : not classified & original description: CDS=1-2109


Gene families : OG0001063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001063_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0006.g003030

Target Alias Description ECC score Gene Family Method Actions
Adi_g056122 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G034400.1 Ceric.32G034400 not classified & original description: pacid=50597704... 0.03 OrthoFinder output from all 47 species
Pnu_g06002 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e022156_P001 BBD1, ATBBD1,... Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006076 FAD-dep_OxRdtase 375 597
IPR003729 Bi_nuclease_dom 122 227
No external refs found!