Description : component *(SF3B1) of splicing factor 3B complex & original description: CDS=1-3894
Gene families : OG0002634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002634_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0006.g003182 | |
| Cluster | HCCA: Cluster_33 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G64270 | No alias | splicing factor, putative | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g03496 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02942 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025852001 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_14294 | No alias | component SF3B1 of splicing factor 3B complex | 0.04 | OrthoFinder output from all 47 species | |
| Gb_20157 | No alias | component SF3B1 of splicing factor 3B complex | 0.03 | OrthoFinder output from all 47 species | |
| MA_11685g0010 | No alias | component SF3B1 of splicing factor 3B complex | 0.04 | OrthoFinder output from all 47 species | |
| Mp5g19650.1 | No alias | component SF3B1 of splicing factor 3B complex | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g04463 | No alias | component *(SF3B1) of splicing factor 3B complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e025224_P001 | Zm00001e025224 | component SF3B1 of splicing factor 3B complex | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006366 | transcription by RNA polymerase II | IEP | HCCA |
| CC | GO:0016459 | myosin complex | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR015016 | SF3b_su1 | 284 | 414 |
| No external refs found! |
