Aliases : EMB2758
Description : not classified & original description: CDS=1-1284
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00067p00084250 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g27110... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00111p00107400 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21065... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00170p00032020 | OTP86,... | Pentatricopeptide repeat-containing protein At5g16860... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s03531p00004900 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g02330,... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g003297 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g09730 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g22656 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g36953 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g38989 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05762 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06363 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06389 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07162 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07456 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07812 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g24134 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g30540 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30874 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g33528 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g24083 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g27901 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09092 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16832 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g21473 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g36807 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g43404 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g68065 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g70213 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene12038.t1 | Aspi01Gene12038 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene33738.t1 | Aspi01Gene33738 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene56180.t1 | EMB2758, Aspi01Gene56180 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0229.g059115 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2115 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0544.g076391 | No alias | not classified & original description: CDS=1-906 | 0.09 | OrthoFinder output from all 47 species | |
| Azfi_s1396.g102567 | No alias | not classified & original description: CDS=1-1371 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s1835.g107332 | CRR22 | not classified & original description: CDS=1-2094 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g07181 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g07684 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20780 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g72718 | MEF21 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.07G061700.1 | Ceric.07G061700 | not classified & original description: pacid=50626878... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.21G004000.1 | Ceric.21G004000 | not classified & original description: pacid=50604228... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.29G050000.1 | Ceric.29G050000 | ssDNA-binding protein *(OSB) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.33G047500.1 | OTP84, Ceric.33G047500 | not classified & original description: pacid=50606812... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.36G058400.1 | Ceric.36G058400 | not classified & original description: pacid=50568396... | 0.04 | OrthoFinder output from all 47 species | |
| Cre12.g483700 | OSB4 | Cell cycle.organelle machineries.DNA... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g05720 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35078 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g39373 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g05649 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g14626 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g16545 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g35959 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g36025 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g45110 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g45907 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g16093 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g19239 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g19380.1 | LOC_Os01g19380 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g37225.1 | LOC_Os05g37225 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g49740.1 | EMB2744, LOC_Os05g49740 | Pentatricopeptide repeat-containing protein At5g39680... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g06490.2 | SLO1, LOC_Os08g06490 | Pentatricopeptide repeat-containing protein At4g22760... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g15460.1 | LOC_Os12g15460 | Pentatricopeptide repeat-containing protein At1g18485... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04787 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g44822 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_187514g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_42343g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| MA_482767g0010 | OTP84 | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | OrthoFinder output from all 47 species | |
| MA_9463538g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
| MA_953793g0020 | DOT4 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g22928 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g22072 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g05131 | OTP82 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g01662 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03036 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g31141 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g46859 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g03353 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g52632 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g53699 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005870 | No alias | not classified & original description: CDS=1-2601 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0021.g008505 | CRR22 | not classified & original description: CDS=1-1692 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013097 | No alias | not classified & original description: CDS=1-2613 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0065.g015944 | CRR22 | not classified & original description: CDS=122-4345 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0077.g017584 | No alias | not classified & original description: CDS=1-3165 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0085.g018372 | No alias | not classified & original description: CDS=50-2203 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0111.g020713 | No alias | not classified & original description: CDS=1-3843 | 0.07 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0147.g023175 | No alias | not classified & original description: CDS=1-2640 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0168.g024290 | No alias | not classified & original description: CDS=1-2301 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0186.g025088 | No alias | not classified & original description: CDS=1-2760 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0237.g026572 | No alias | not classified & original description: CDS=1-1578 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0245.g026691 | No alias | not classified & original description: CDS=1-2898 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g14564 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g14924 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g22788 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24177 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g48312 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g007430.1.1 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g006700.1.1 | Solyc11g006700 | Pentatricopeptide repeat-containing protein At5g04780,... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g02637 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g09940 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g29950 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g56367 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g05186 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g16979 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g17476 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g27040 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g44234 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g46155 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003725 | double-stranded RNA binding | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 259 | 281 |
| IPR002885 | Pentatricopeptide_repeat | 361 | 383 |
| IPR002885 | Pentatricopeptide_repeat | 187 | 204 |
| IPR002885 | Pentatricopeptide_repeat | 159 | 186 |
| IPR002885 | Pentatricopeptide_repeat | 237 | 253 |
| IPR002885 | Pentatricopeptide_repeat | 209 | 233 |
| IPR002885 | Pentatricopeptide_repeat | 82 | 130 |
| IPR002885 | Pentatricopeptide_repeat | 287 | 332 |
| No external refs found! |
