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  5. Sacu_v1.1_s0007.g003656

Sacu_v1.1_s0007.g003656


Description : not classified & original description: CDS=1-687


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0007.g003656

Target Alias Description ECC score Gene Family Method Actions
Als_g04941 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Cba_g00875 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_24271g0020 AtMYB93, MYB93 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_33964g0010 AtMYB20, MYB20 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Msp_g07885 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19733 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.03 OrthoFinder output from all 47 species
Sam_g08648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g45869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!