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  5. Sacu_v1.1_s0008.g003971

Sacu_v1.1_s0008.g003971 (HSP17.6II)


Aliases : HSP17.6II

Description : not classified & original description: CDS=770-1951


Gene families : OG0000041 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0008.g003971
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AT2G19310 No alias HSP20-like chaperones superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G37670 No alias HSP20-like chaperones superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g33179 ATHSP17.4, HSP17.4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51401 HSP18.2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21204 HSP18.2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27132 HSP18.2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71607.t1 HSP17.6II,... class-C-II small heat-shock-responsive protein &... 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013843 No alias not classified & original description: CDS=145-1341 0.03 OrthoFinder output from all 47 species
Dac_g36477 ATHSP17.4, HSP17.4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20351 HSP18.2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23879 HSP17.6II not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_104614g0010 HSP17.6A,... class-C-II small heat-shock-responsive protein 0.01 OrthoFinder output from all 47 species
Mp7g02030.1 No alias 18.2 kDa class I heat shock protein OS=Medicago sativa... 0.02 OrthoFinder output from all 47 species
Mp7g16750.1 ATHSP17.4, HSP17.4 18.5 kDa class I heat shock protein OS=Glycine max... 0.02 OrthoFinder output from all 47 species
Msp_g00787 HSP18.2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39150 HSP17.6II class-C-II small heat-shock-responsive protein &... 0.02 OrthoFinder output from all 47 species
Pnu_g05597 HSP18.2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g25055 HSP17.6A,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54978 HSP18.2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g47420 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g52769 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g080410.3.1 Solyc02g080410 class-C-V small heat-shock-responsive protein 0.04 OrthoFinder output from all 47 species
Spa_g31719 HSP18.2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g38014 HSP18.2 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 287 389
No external refs found!