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  5. Sacu_v1.1_s0008.g003978

Sacu_v1.1_s0008.g003978


Description : not classified & original description: CDS=1-753


Gene families : OG0000217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0008.g003978
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00028850 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G28400 No alias Protein of unknown function, DUF584 0.02 OrthoFinder output from all 47 species
AT2G34340 No alias Protein of unknown function, DUF584 0.03 OrthoFinder output from all 47 species
AT4G04630 No alias Protein of unknown function, DUF584 0.05 OrthoFinder output from all 47 species
AT5G03230 No alias Protein of unknown function, DUF584 0.02 OrthoFinder output from all 47 species
AT5G45630 No alias Protein of unknown function, DUF584 0.04 OrthoFinder output from all 47 species
Aev_g01052 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05617 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G107800.1 Ceric.02G107800 not classified & original description: pacid=50585116... 0.03 OrthoFinder output from all 47 species
Ceric.1Z000200.1 Ceric.1Z000200 not classified & original description: pacid=50640947... 0.03 OrthoFinder output from all 47 species
Dac_g37689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025190001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01033884001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os01g52730.1 LOC_Os01g52730 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g54450.1 LOC_Os01g54450 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g02280.1 LOC_Os03g02280 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g32810.1 LOC_Os07g32810 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g33270.1 LOC_Os07g33270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g27350.1 LOC_Os10g27350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g33990.1 LOC_Os10g33990 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g16906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10434437g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_2588g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_54260g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g37233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005504 No alias not classified & original description: CDS=1-846 0.04 OrthoFinder output from all 47 species
Smo413288 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc02g080580.1.1 Solyc02g080580 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc07g064650.3.1 Solyc07g064650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g11425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g36553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21922 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e012668_P001 Zm00001e012668 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e019192_P001 Zm00001e019192 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019921_P001 Zm00001e019921 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035093_P001 Zm00001e035093 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 47 250
No external refs found!