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  5. Sacu_v1.1_s0010.g004721

Sacu_v1.1_s0010.g004721


Description : not classified & original description: CDS=1-2922


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0010.g004721
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AT3G04960 No alias Domain of unknown function (DUF3444) 0.03 OrthoFinder output from all 47 species
Adi_g087018 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02185 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G032100.1 Ceric.13G032100 not classified & original description: pacid=50635670... 0.03 OrthoFinder output from all 47 species
Ceric.1Z097000.1 Ceric.1Z097000 not classified & original description: pacid=50640979... 0.04 OrthoFinder output from all 47 species
Dcu_g05585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_17193 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g27740.3 LOC_Os01g27740 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g23759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g51313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g18019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01029 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036676_P001 Zm00001e036676 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009584 detection of visible light IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032469 endoplasmic reticulum calcium ion homeostasis IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 67 128
IPR024593 DUF3444 695 893
No external refs found!